Numero del progetto: 18.00.16.06.01

Detection and In-Depth Understanding of Viral, Bacterial and Phytoplasma Diseases in Field Crops

The ‘Virology and Phytoplasmology’ group at Agroscope Changins diagnoses viral, phytoplasma and bacterial diseases of plants in all crops. A national centre of excellence, we identify or anticipate serious epidemic or emerging diseases – often quarantine diseases – with the aim of protecting our crops, within a context of global warming and growing globalisation. To do this, we develop tools and diagnostic methods for work in microbiology, serology, molecular biology and genetics. Diagnosis and the necessary tools – reliable and internationally recognised – are essential for modern, sustainable plant protection, for both the environment and consumers.

Reynard J.S., Schumpp O.
Raising awareness among plant virologists on the richness of their high-throughput sequencing data.
In: International Advances In Plant Virology. 20.04., Association of Applied Biologists. 2021, 1.

Kutnjak D., Tamisier L., Adams I., Boonham N., Candresse T., Chiumenti M., De Jonghe K., Kreuze J., Lefebvre M., Silva G., Malapi-Wight M., Margaria P., Mavrič Pleško I., McGreig S., Miozzi L. e altri
A primer on the analysis of high‐throughput sequencing data for detection of plant viruses.
Microorganisms, 9, 2021, 1-31.

Groux R., Mahillon M., Bussereau F., Brodard J., Debonneville C., Kellenberger I., Steinger T., Schumpp O.
Distribution and intraspecific variation of Beet yellows virus (BYV) in Switzerland.
In: Rencontres virologie végétale 2021. 12.09., Ed. Agroscope, Aussois - Inrae. 2021, 1.

Bussereau F., Cornamusaz B., Debonneville C., Schumpp O.
Syndrôme des basses richesses.
In: Journée Phytosanitaire Grandes Cultures 2021. 19.01., Nyon Agroscope. 2021, 1-12.

Mandelli L., Debonneville C., Battelli R., Condera M., Jeanrenaud M., Jermini M., Linder C., Rizzoli A., Viret O., Schumpp O.
Spread of flavescence dorée phytoplasma in formerly and recently colonised areas of Switzerland.
In: EURL-Virologie. 10.06., EURL-Virologie. 2021, 1-11.

Reynard J.-S., Turco S., Brodard J., Kellenberger I., Maclot F., Schumpp O., Gugerli P., Pooggin M. M.
Identification and molecular characterization of a novel hordeivirus associated with yellow mosaic disease of privet (Ligustrum vulgare) in Europe.
Frontiers in Microbiology, online, (27 September), 2021, 1-19.

Jaccard A., Brodard J., Kellenberger I., Schnée S., Gindro K., Schumpp O.
Understanding the role of mycoviruses in vine fungal communities.
In: PhD Symposium. 18.03., Agroscope. 2021.

Jaccard A., Brodard J., Kellenberger I., Schnée S., Gindro K., Schumpp O.
Understanding the role of mycoviruses in vine fungal communities.
In: D.Day 2021 – Université de Lausanne. 28.04., Ed. Agroscope, Université de Lausanne. 2021.

Schumpp O., Bréchon A., Brodard J., Dupuis B., Farinelli L., Frei P., Otten P., Pellet D.
Large-Scale RT-qPCR diagnostics for seed potato certification.
Potato Research, 64, 2021, 553-569.

Cornamusaz B., Bussereau F., Steinger T., Schumpp O.
Viröse Vergilbung der Zuckerrüben: Zustand, Überwachung von Flügen und Anwendungsempfehlungen.
In: Journée Phytosanitaire Grandes Cultures 2021. 19.01., Nyon Agroscope. 2021.

Rienth M., Ghaffari S., Reynard J.-S.
Impact of grapevine leafroll virus infections on vine physiology and the berry transcriptome.
In: . 23.-28. Juni. 2019, 1-6.

Schaerer S., Jeanrenaud M., Linder C.
Bilan de trois années de lutte contre la flavescence dorée dans le canton de Vaud.
Revue suisse de viticulture arboriculture horticulture, 51, (4), 2019, 240-246.

Reynard J.-S., Schaerer S.
Virus, bactéries et phytoplasmes de la vigne.
Revue suisse de viticulture arboriculture horticulture, 51, (3), 2019, 168-172.

Turco S., Golyaev V., Seguin J., Gilli C., Farinelli L., Boller T., Schumpp O., Pooggin M.M.
Small RNA-omics for virome reconstruction and antiviral defense characterization in mixed infections of cultivated Solanum plants.
Molecular Plant-Microbe Interactions, 31, (7), 2018, 707-723.

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